STRINGSTRING
JNHE01000042_gene3190 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000042_gene3190" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000042_gene3190annotation not available (375 aa)    
Predicted Functional Partners:
JNHE01000047_gene1547
annotation not available (192 aa)
   
  0.793
JNHE01000035_gene4230
annotation not available (185 aa)
   
  0.793
JNHE01000010_gene3542
annotation not available (197 aa)
   
  0.793
JNHE01000003_gene1948
annotation not available (229 aa)
   
  0.793
JNHE01000002_gene2413
annotation not available (175 aa)
   
  0.793
JNHE01000042_gene3192
annotation not available (547 aa)
 
          0.784
JNHE01000042_gene3189
annotation not available (119 aa)
 
          0.778
JNHE01000042_gene3191
annotation not available (169 aa)
 
 
  0.761
JNHE01000001_gene192
annotation not available (843 aa)
         
  0.750
JNHE01000042_gene3193
annotation not available (251 aa)
 
 
  0.742
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
Server load: low (10%) [HD]