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JNHE01000042_gene3194 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000042_gene3194" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000042_gene3194annotation not available (517 aa)    
Predicted Functional Partners:
JNHE01000042_gene3195
annotation not available (453 aa)
 
        0.943
JNHE01000001_gene313
annotation not available (433 aa)
 
        0.795
JNHE01000037_gene4283
annotation not available (456 aa)
 
        0.794
JNHE01000037_gene4281
annotation not available (784 aa)
 
   
  0.791
JNHE01000001_gene462
annotation not available (449 aa)
 
        0.786
JNHE01000041_gene3178
annotation not available (446 aa)
 
        0.784
JNHE01000009_gene3325
annotation not available (457 aa)
 
        0.782
JNHE01000042_gene3183
annotation not available (183 aa)
     
  0.773
JNHE01000001_gene406
Lipid A deacylase; Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety; Belongs to the PagL family (154 aa)
     
  0.773
JNHE01000019_gene4147
annotation not available (164 aa)
       
 
  0.724
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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