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JNHE01000042_gene3198 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000042_gene3198" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000042_gene3198annotation not available (275 aa)    
Predicted Functional Partners:
JNHE01000042_gene3197
annotation not available (307 aa)
 
          0.891
JNHE01000042_gene3196
annotation not available (366 aa)
              0.846
JNHE01000037_gene4296
annotation not available (677 aa)
 
   
  0.740
JNHE01000042_gene3199
annotation not available (351 aa)
 
          0.731
JNHE01000017_gene4615
annotation not available (223 aa)
   
  0.714
JNHE01000006_gene1090
annotation not available (686 aa)
       
  0.694
JNHE01000032_gene925
annotation not available (1090 aa)
 
   
  0.693
JNHE01000042_gene3192
annotation not available (547 aa)
 
 
    0.654
JNHE01000001_gene438
Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family (1311 aa)
   
        0.647
JNHE01000001_gene132
annotation not available (1009 aa)
   
 
  0.584
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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