STRINGSTRING
JNHE01000042_gene3202 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000042_gene3202" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000042_gene3202annotation not available (207 aa)    
Predicted Functional Partners:
JNHE01000042_gene3203
annotation not available (452 aa)
              0.882
JNHE01000042_gene3201
annotation not available (128 aa)
              0.871
JNHE01000042_gene3204
annotation not available (140 aa)
              0.618
JNHE01000042_gene3200
annotation not available (293 aa)
              0.588
JNHE01000010_gene3524
annotation not available (271 aa)
         
  0.534
JNHE01000015_gene4440
annotation not available (149 aa)
   
        0.512
JNHE01000004_gene1734
HTH-type transcriptional regulator IscR; Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins (165 aa)
     
        0.426
JNHE01000003_gene2001
annotation not available (148 aa)
     
        0.426
JNHE01000003_gene1967
annotation not available (390 aa)
     
        0.420
JNHE01000001_gene544
annotation not available (377 aa)
     
        0.420
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
Server load: low (11%) [HD]