STRINGSTRING
JNHE01000042_gene3206 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000042_gene3206" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000042_gene3206annotation not available (432 aa)    
Predicted Functional Partners:
JNHE01000031_gene680
annotation not available (476 aa)
 
  0.961
JNHE01000001_gene365
annotation not available (476 aa)
 
  0.960
JNHE01000042_gene3205
annotation not available (279 aa)
 
 
  0.957
JNHE01000032_gene893
annotation not available (307 aa)
  0.861
JNHE01000042_gene3200
annotation not available (293 aa)
 
 
  0.853
JNHE01000013_gene2760
annotation not available (325 aa)
   
  0.802
JNHE01000028_gene842
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3’ and C5’positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose; Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family (182 aa)
   
   
  0.788
JNHE01000007_gene1259
annotation not available (136 aa)
   
  0.785
JNHE01000002_gene2268
annotation not available (128 aa)
   
  0.785
JNHE01000001_gene176
annotation not available (575 aa)
         
  0.783
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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