STRINGSTRING
JNHE01000042_gene3211 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000042_gene3211" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000042_gene3211annotation not available (222 aa)    
Predicted Functional Partners:
htpX
annotation not available (286 aa)
   
   
  0.754
JNHE01000042_gene3215
Sulfurtransferase; Part of a sulfur-relay system (111 aa)
   
        0.687
JNHE01000012_gene1370
annotation not available (339 aa)
   
 
  0.671
JNHE01000042_gene3216
annotation not available (331 aa)
              0.664
JNHE01000042_gene3214
annotation not available (99 aa)
              0.664
JNHE01000042_gene3213
annotation not available (119 aa)
              0.664
JNHE01000042_gene3212
annotation not available (130 aa)
              0.664
JNHE01000025_gene2842
annotation not available (482 aa)
   
        0.655
JNHE01000030_gene661
annotation not available (77 aa)
         
  0.578
JNHE01000025_gene2834
Protein HflC; HflC and HflK could regulate a protease (289 aa)
     
 
  0.567
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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