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JNHE01000043_gene3220 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000043_gene3220" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000043_gene3220annotation not available (374 aa)    
Predicted Functional Partners:
JNHE01000043_gene3222
annotation not available (355 aa)
 
  0.983
JNHE01000043_gene3221
annotation not available (901 aa)
 
0.957
JNHE01000003_gene1981
annotation not available (312 aa)
  0.767
JNHE01000019_gene4116
annotation not available (264 aa)
  0.629
JNHE01000043_gene3224
annotation not available (144 aa)
              0.624
JNHE01000043_gene3223
annotation not available (612 aa)
              0.600
JNHE01000003_gene1980
annotation not available (320 aa)
 
 
 
  0.539
JNHE01000051_gene2700
annotation not available (271 aa)
 
  0.525
JNHE01000012_gene1364
annotation not available (310 aa)
 
  0.525
JNHE01000001_gene524
annotation not available (309 aa)
 
  0.525
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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