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JNHE01000043_gene3233 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000043_gene3233" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000043_gene3233annotation not available (333 aa)    
Predicted Functional Partners:
JNHE01000043_gene3234
annotation not available (517 aa)
 
 
  0.988
JNHE01000004_gene1612
annotation not available (368 aa)
 
 
  0.924
JNHE01000047_gene1533
annotation not available (328 aa)
   
 
  0.813
JNHE01000015_gene4438
annotation not available (629 aa)
   
   
  0.782
JNHE01000033_gene976
annotation not available (316 aa)
     
   
  0.734
JNHE01000001_gene360
annotation not available (315 aa)
     
   
  0.734
JNHE01000024_gene2431
annotation not available (311 aa)
   
 
  0.650
JNHE01000043_gene3232
annotation not available (92 aa)
              0.579
JNHE01000040_gene90
Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system (372 aa)
   
 
  0.568
JNHE01000026_gene3084
Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system (365 aa)
   
 
  0.568
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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