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JNHE01000043_gene3242 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000043_gene3242" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000043_gene3242annotation not available (293 aa)    
Predicted Functional Partners:
aguA
Agmatine deiminase; Mediates the hydrolysis of agmatine into N- carbamoylputrescine in the arginine decarboxylase (ADC) pathway of putrescine biosynthesis, a basic polyamine (368 aa)
 
  0.998
JNHE01000001_gene193
annotation not available (387 aa)
       
  0.923
JNHE01000002_gene2117
annotation not available (250 aa)
       
  0.881
JNHE01000006_gene1029
annotation not available (1441 aa)
       
  0.866
JNHE01000016_gene4474
annotation not available (736 aa)
   
 
  0.797
JNHE01000018_gene3857
annotation not available (319 aa)
   
  0.794
JNHE01000030_gene663
annotation not available (445 aa)
     
  0.783
JNHE01000034_gene4186
annotation not available (399 aa)
 
 
    0.781
JNHE01000002_gene2313
Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)- malate; Belongs to the class-I fumarase family (507 aa)
       
    0.751
JNHE01000001_gene214
annotation not available (183 aa)
 
    0.744
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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