STRINGSTRING
JNHE01000046_gene3778 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000046_gene3778" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000046_gene3778annotation not available (68 aa)    
Predicted Functional Partners:
JNHE01000046_gene3779
annotation not available (232 aa)
              0.846
JNHE01000020_gene4002
annotation not available (272 aa)
   
          0.719
JNHE01000046_gene3777
annotation not available (237 aa)
              0.697
JNHE01000048_gene1518
annotation not available (82 aa)
   
          0.689
JNHE01000046_gene3781
annotation not available (79 aa)
   
          0.662
JNHE01000029_gene712
annotation not available (64 aa)
   
          0.648
JNHE01000001_gene147
annotation not available (164 aa)
   
          0.636
JNHE01000022_gene2583
annotation not available (192 aa)
   
          0.634
JNHE01000046_gene3782
annotation not available (137 aa)
   
          0.628
JNHE01000021_gene4061
annotation not available (137 aa)
   
          0.588
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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