STRINGSTRING
JNHE01000046_gene3792 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000046_gene3792" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000046_gene3792annotation not available (589 aa)    
Predicted Functional Partners:
JNHE01000046_gene3793
annotation not available (210 aa)
 
        0.913
JNHE01000046_gene3794
annotation not available (312 aa)
   
        0.898
JNHE01000023_gene2564
annotation not available (300 aa)
       
      0.678
JNHE01000020_gene3996
annotation not available (309 aa)
       
      0.678
JNHE01000014_gene2932
annotation not available (299 aa)
       
      0.678
JNHE01000001_gene226
annotation not available (322 aa)
       
      0.678
atpA
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit (514 aa)
     
  0.671
JNHE01000026_gene3065
annotation not available (506 aa)
       
  0.602
JNHE01000046_gene3795
annotation not available (101 aa)
   
        0.591
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (931 aa)
   
 
  0.530
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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