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JNHE01000046_gene3794 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000046_gene3794" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000046_gene3794annotation not available (312 aa)    
Predicted Functional Partners:
JNHE01000046_gene3793
annotation not available (210 aa)
   
        0.898
JNHE01000046_gene3792
annotation not available (589 aa)
   
        0.898
JNHE01000046_gene3795
annotation not available (101 aa)
   
        0.626
JNHE01000046_gene3796
annotation not available (165 aa)
              0.515
JNHE01000001_gene532
Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil (211 aa)
            0.486
JNHE01000001_gene234
Cell shape-determining protein MreC; Involved in formation and maintenance of cell shape (327 aa)
     
        0.416
obg
GTPase Obg; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control; Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family (386 aa)
   
      0.405
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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