STRINGSTRING
JNHE01000046_gene3797 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000046_gene3797" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000046_gene3797annotation not available (336 aa)    
Predicted Functional Partners:
JNHE01000004_gene1572
annotation not available (291 aa)
   
 
  0.766
fumC
Fumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily (464 aa)
       
  0.721
JNHE01000017_gene4596
annotation not available (468 aa)
   
          0.716
JNHE01000023_gene2527
annotation not available (317 aa)
       
  0.712
JNHE01000046_gene3799
annotation not available (205 aa)
 
     
  0.690
JNHE01000027_gene3036
annotation not available (356 aa)
       
  0.689
JNHE01000025_gene2840
annotation not available (458 aa)
         
  0.668
JNHE01000001_gene211
annotation not available (129 aa)
   
        0.666
JNHE01000006_gene1017
annotation not available (147 aa)
   
          0.665
JNHE01000018_gene3852
annotation not available (280 aa)
       
    0.647
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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