STRINGSTRING
JNHE01000048_gene1510 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000048_gene1510" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000048_gene1510annotation not available (147 aa)    
Predicted Functional Partners:
JNHE01000009_gene3343
annotation not available (76 aa)
   
          0.709
JNHE01000030_gene617
annotation not available (279 aa)
   
          0.679
JNHE01000030_gene648
annotation not available (236 aa)
   
          0.678
JNHE01000018_gene3919
annotation not available (380 aa)
   
          0.648
JNHE01000022_gene2626
annotation not available (226 aa)
   
          0.607
JNHE01000048_gene1511
annotation not available (244 aa)
              0.606
JNHE01000059_gene996
annotation not available (221 aa)
   
          0.585
JNHE01000002_gene2335
annotation not available (171 aa)
   
          0.548
JNHE01000002_gene2349
annotation not available (195 aa)
   
          0.544
JNHE01000024_gene2434
annotation not available (238 aa)
   
          0.542
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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