STRINGSTRING
JNHE01000054_gene3131 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000054_gene3131" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000054_gene3131annotation not available (60 aa)    
Predicted Functional Partners:
JNHE01000001_gene585
annotation not available (64 aa)
   
          0.783
JNHE01000014_gene2931
annotation not available (223 aa)
   
          0.764
JNHE01000003_gene2046
annotation not available (342 aa)
   
          0.735
JNHE01000001_gene455
annotation not available (296 aa)
   
          0.726
JNHE01000032_gene917
annotation not available (232 aa)
   
          0.697
JNHE01000036_gene4311
annotation not available (723 aa)
   
          0.680
JNHE01000009_gene3379
annotation not available (134 aa)
   
          0.643
JNHE01000002_gene2142
annotation not available (91 aa)
   
          0.622
JNHE01000009_gene3340
annotation not available (90 aa)
   
          0.613
JNHE01000004_gene1602
annotation not available (83 aa)
   
          0.612
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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