STRINGSTRING
JNHE01000054_gene3142 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000054_gene3142" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000054_gene3142annotation not available (231 aa)    
Predicted Functional Partners:
JNHE01000029_gene712
annotation not available (64 aa)
   
          0.670
JNHE01000010_gene3496
annotation not available (59 aa)
   
          0.670
JNHE01000025_gene2855
annotation not available (515 aa)
   
          0.666
JNHE01000025_gene2856
annotation not available (302 aa)
   
          0.616
JNHE01000023_gene2548
annotation not available (143 aa)
   
          0.614
JNHE01000025_gene2849
annotation not available (509 aa)
   
          0.608
JNHE01000003_gene1983
annotation not available (53 aa)
   
          0.597
JNHE01000018_gene3933
annotation not available (143 aa)
   
          0.582
JNHE01000034_gene4179
annotation not available (413 aa)
   
          0.572
JNHE01000001_gene136
annotation not available (48 aa)
   
          0.564
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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