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JNHE01000056_gene3701 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000056_gene3701" - annotation not available in Pseudomonas oleovorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000056_gene3701annotation not available (324 aa)    
Predicted Functional Partners:
rpoD
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (602 aa)
     
 
  0.735
JNHE01000021_gene4039
annotation not available (367 aa)
         
  0.721
rpoH
annotation not available (264 aa)
     
 
  0.697
rpoS
annotation not available (316 aa)
     
 
  0.697
JNHE01000022_gene2590
annotation not available (92 aa)
       
 
  0.681
himD
Integration host factor subunit beta; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control (94 aa)
       
 
  0.681
JNHE01000016_gene4488
Bacterial nucleoid protein HU beta subunit; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions (63 aa)
       
 
  0.681
JNHE01000010_gene3430
Bacterial nucleoid protein HU alpha subunit; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions (90 aa)
       
 
  0.681
JNHE01000016_gene4519
annotation not available (419 aa)
   
 
  0.653
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (306 aa)
   
   
  0.635
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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