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JNHE01000056_gene3705 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000056_gene3705" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000056_gene3705annotation not available (165 aa)    
Predicted Functional Partners:
JNHE01000054_gene3138
annotation not available (299 aa)
       
  0.808
JNHE01000023_gene2574
annotation not available (298 aa)
       
  0.808
JNHE01000015_gene4384
annotation not available (305 aa)
       
  0.808
JNHE01000004_gene1756
annotation not available (289 aa)
       
  0.808
JNHE01000001_gene133
annotation not available (287 aa)
       
  0.808
JNHE01000056_gene3706
annotation not available (157 aa)
   
        0.793
dapA
4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta- semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) (287 aa)
   
 
    0.714
JNHE01000053_gene2690
annotation not available (212 aa)
   
          0.711
JNHE01000001_gene262
annotation not available (101 aa)
   
        0.655
JNHE01000050_gene2718
annotation not available (84 aa)
   
        0.649
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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