STRINGSTRING
JNHE01000056_gene3706 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000056_gene3706" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000056_gene3706annotation not available (157 aa)    
Predicted Functional Partners:
JNHE01000010_gene3541
annotation not available (212 aa)
 
 
  0.901
JNHE01000047_gene1528
annotation not available (187 aa)
 
 
0.885
JNHE01000015_gene4459
annotation not available (108 aa)
     
 
  0.863
rpmI
annotation not available (61 aa)
   
        0.855
rpmE
50S ribosomal protein L31; Binds the 23S rRNA (70 aa)
     
        0.816
rpmA
annotation not available (61 aa)
     
 
    0.815
trpC
annotation not available (279 aa)
   
 
    0.798
JNHE01000006_gene1016
annotation not available (144 aa)
     
 
  0.797
JNHE01000056_gene3705
annotation not available (165 aa)
   
        0.793
JNHE01000018_gene3874
annotation not available (454 aa)
   
        0.781
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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