STRINGSTRING
JNHE01000057_gene105 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000057_gene105" - annotation not available in Pseudomonas oleovorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000057_gene105annotation not available (154 aa)    
Predicted Functional Partners:
JNHE01000057_gene103
annotation not available (107 aa)
 
        0.881
JNHE01000057_gene104
annotation not available (121 aa)
              0.861
JNHE01000036_gene4316
annotation not available (63 aa)
   
          0.732
JNHE01000003_gene1937
annotation not available (176 aa)
 
          0.659
JNHE01000004_gene1576
annotation not available (58 aa)
   
          0.655
JNHE01000034_gene4194
annotation not available (83 aa)
   
          0.640
gidA
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family (622 aa)
   
      0.636
JNHE01000004_gene1626
annotation not available (114 aa)
   
          0.629
JNHE01000026_gene3065
annotation not available (506 aa)
   
  0.580
JNHE01000030_gene636
annotation not available (552 aa)
   
 
  0.579
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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