STRINGSTRING
JNHE01000069_gene4350 protein (Pseudomonas oleovorans) - STRING interaction network
"JNHE01000069_gene4350" - annotation not available in Pseudomonas oleovorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNHE01000069_gene4350annotation not available (698 aa)    
Predicted Functional Partners:
JNHE01000069_gene4351
annotation not available (107 aa)
 
 
  0.993
JNHE01000087_gene4352
annotation not available (334 aa)
 
  0.961
JNHE01000018_gene3848
annotation not available (452 aa)
 
  0.874
JNHE01000030_gene624
annotation not available (438 aa)
 
  0.873
JNHE01000018_gene3846
annotation not available (429 aa)
   
 
  0.856
JNHE01000033_gene940
annotation not available (635 aa)
 
   
  0.798
JNHE01000025_gene2862
annotation not available (480 aa)
   
 
  0.785
JNHE01000021_gene4088
annotation not available (1167 aa)
 
   
  0.603
prpB
2-methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate; Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family (295 aa)
     
        0.499
JNHE01000014_gene2913
annotation not available (698 aa)
   
 
  0.426
Your Current Organism:
Pseudomonas oleovorans
NCBI taxonomy Id: 301
Other names: ATCC 8062, CCUG 2087, CFBP 5589, CIP 59.11, IFO 13583, JCM 11598, LMG 2229, NBRC 13583, NCIMB 6576, NCTC 10692, NRRL B-778, P. oleovorans, Pseudomonas oleovorans, Pseudomonas sp. MGY01
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