STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_09058Uncharacterized protein KIAA1211-like. (437 aa)    
Predicted Functional Partners:
N306_09057
Uncharacterized protein KIAA1211-like.
 
 0.945
N306_13160
Survival motor neuron protein.
    
 0.735
N306_03634
Fanconi anemia group M protein.
    
 0.709
N306_11981
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.697
N306_10527
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
    
 0.694
N306_04234
Small nuclear ribonucleoprotein F.
    
  0.683
N306_15208
Small nuclear ribonucleoprotein G.
    
  0.661
N306_13677
Putative ATP-dependent RNA helicase DDX20; Belongs to the DEAD box helicase family.
   
 0.628
N306_04191
Partner and localizer of BRCA2.
    
  0.623
N306_11301
DNA polymerase zeta catalytic subunit.
   
 0.621
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.