STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_15306Myelin expression factor 2. (553 aa)    
Predicted Functional Partners:
N306_05639
DNA-directed RNA polymerases I, II, and III subunit RPABC4.
   
 0.745
N306_11756
Nuclear cap-binding protein subunit 1.
    
 0.717
N306_02458
Histone H2A deubiquitinase MYSM1.
   
 0.690
N306_13048
Splicing factor 3B subunit 1.
    
 0.674
N306_02680
Uncharacterized protein.
    
 0.668
N306_11981
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.660
N306_10527
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
   
 0.658
N306_13603
U2 small nuclear ribonucleoprotein B.
   
 0.657
N306_09559
RNA-binding protein 40.
    
 0.654
N306_15208
Small nuclear ribonucleoprotein G.
    
 0.654
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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