STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_11869Protocadherin-1. (924 aa)    
Predicted Functional Partners:
N306_11868
Uncharacterized protein.
 
      0.900
N306_15211
Uncharacterized protein.
 
      0.899
N306_14688
Protocadherin-9.
 
    
 0.890
N306_10748
Protocadherin-9.
 
    
 0.826
N306_14687
Protocadherin-9.
 
    
 0.732
N306_11193
Lipoma HMGIC fusion partner-like 2 protein.
    
  0.582
N306_03762
Unconventional myosin-IXa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.555
N306_00795
Integrin beta.
    
 0.538
N306_08978
Protein eyes shut.
 
  
   0.533
N306_12533
Citron Rho-interacting kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
    
  0.520
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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