STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_15242Vacuolar protein sorting-associated protein 13C. (3694 aa)    
Predicted Functional Partners:
N306_02721
Vacuolar protein sorting-associated protein 35.
   
 
 0.664
N306_11056
Cyclin-G-associated kinase.
    
 
 0.622
N306_06269
Putative tyrosine-protein phosphatase auxilin.
    
 
 0.616
N306_05436
Synaptojanin-1.
    
 
 0.579
N306_08094
Vam6/Vps39-like.
   
 
 0.546
N306_08134
Chromosome transmission fidelity protein 18.
    
   0.528
N306_12155
Synaptojanin-2.
    
 
 0.491
N306_15263
Neuronal acetylcholine receptor subunit alpha-5.
   
  
 0.486
N306_12624
DnaJ subfamily C member 13.
   
  
 0.478
N306_00930
85/88 kDa calcium-independent phospholipase A2.
   
  
 0.473
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.