N306_02019 protein (Opisthocomus hoazin) - STRING interaction network

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Score

N306_02019

U6 snRNA-associated Sm-like LSm6. (80 aa)

Predicted Functional Partners:

N306_02055

0.999

LSM3

0.999

LSM8

0.999

LSM5

0.999

N306_14004

0.999

N306_03754

0.998

N306_00776

0.993

N306_03536

0.992

N306_03901

0.992

N306_05084

0.991

Your Current Organism:

Opisthocomus hoazin

NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LSM3	LSM5	A0A091W671	A0A091WQJ9	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.999
LSM3	LSM8	A0A091W671	A0A091WPY8	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
LSM3	N306_00776	A0A091W671	A0A091XU97	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Squamous cell carcinoma antigen recognized by T-cells 3.	0.994
LSM3	N306_02019	A0A091W671	A0A091WQ52	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like LSm6.	0.999
LSM3	N306_02055	A0A091W671	A0A091W4H5	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like LSm4.	0.999
LSM3	N306_03536	A0A091W671	A0A091V4U7	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U5 small nuclear ribonucleoprotein 200 kDa helicase.	0.993
LSM3	N306_03754	A0A091W671	A0A091W9D3	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Protein PAT1 2.	0.999
LSM3	N306_03901	A0A091W671	A0A091VPS1	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U2 small nuclear ribonucleoprotein A.	0.953
LSM3	N306_05084	A0A091W671	A0A091WQW0	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U4/U6 small nuclear ribonucleoprotein Prp3.	0.996
LSM3	N306_14004	A0A091W671	A0A091XE96	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like LSm7.	0.999
LSM5	LSM3	A0A091WQJ9	A0A091W671	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
LSM5	LSM8	A0A091WQJ9	A0A091WPY8	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
LSM5	N306_00776	A0A091WQJ9	A0A091XU97	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	Squamous cell carcinoma antigen recognized by T-cells 3.	0.994
LSM5	N306_02019	A0A091WQJ9	A0A091WQ52	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	U6 snRNA-associated Sm-like LSm6.	0.999
LSM5	N306_02055	A0A091WQJ9	A0A091W4H5	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	U6 snRNA-associated Sm-like LSm4.	0.999
LSM5	N306_03536	A0A091WQJ9	A0A091V4U7	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	U5 small nuclear ribonucleoprotein 200 kDa helicase.	0.992
LSM5	N306_03754	A0A091WQJ9	A0A091W9D3	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	Protein PAT1 2.	0.998
LSM5	N306_03901	A0A091WQJ9	A0A091VPS1	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	U2 small nuclear ribonucleoprotein A.	0.910
LSM5	N306_05084	A0A091WQJ9	A0A091WQW0	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	U4/U6 small nuclear ribonucleoprotein Prp3.	0.969
LSM5	N306_14004	A0A091WQJ9	A0A091XE96	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	U6 snRNA-associated Sm-like LSm7.	0.999