STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N306_06635Reverse transcriptase domain-containing protein. (217 aa)    
Predicted Functional Partners:
N306_03634
Fanconi anemia group M protein.
    
 0.916
N306_14848
GDH/6PGL endoplasmic bifunctional protein.
   
 
 0.794
N306_08126
Meiosis-specific with OB domain-containing protein.
    
 0.576
N306_00166
Protein lin-52.
    
 0.550
N306_05746
Protein lin-9.
    
 0.544
N306_01027
Protein lin-54.
    
 0.540
N306_07658
Replication protein A 32 kDa subunit.
    
 0.465
N306_03755
Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.
    
 0.465
N306_05531
DNA repair endonuclease XPF.
    
  0.465
N306_05342
Centromere protein S.
    
  0.455
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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