STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2K3CNC7NnrU domain-containing protein. (350 aa)    
Predicted Functional Partners:
ZDS1
Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.
  
  
 0.833
PDS
Chloroplast phytoene desaturase.
  
  
 0.768
A0A2K3CSZ6
Amino_oxidase domain-containing protein.
   
 
 0.683
LCYE
Lycopene epsilon cyclase.
      
 0.646
LCYB
Putative chloroplast lycopene beta cyclase.
      
 0.643
ZEP1
Zeaxanthin epoxidase.
      
 0.589
PSY
Chloroplast phytoene synthase.
      
 0.575
CUL2
CULLIN_2 domain-containing protein; Belongs to the cullin family.
      
 0.516
A0A2K3DHB8
Uncharacterized protein; Belongs to the cytochrome P450 family.
      
 0.515
dxs
1-deoxy-D-xylulose-5-phosphate synthase.
      
 0.515
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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