STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2K3CQV0NUFIP1 domain-containing protein. (981 aa)    
Predicted Functional Partners:
A0A2K3DIH9
Uncharacterized protein.
     
 0.999
A0A2K3CS30
Fip1 domain-containing protein.
    
 0.918
A0A2K3CZU5
CPSF_A domain-containing protein.
   
 0.918
A0A2K3D2B0
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.918
A0A2K3DM00
WD_REPEATS_REGION domain-containing protein.
    
 0.918
A0A2K3E241
Uncharacterized protein.
    
 0.918
A0A2K3D2X4
Suf domain-containing protein.
    
 0.912
PAP1
Uncharacterized protein.
    
 0.908
A0A2K3DC04
Pre-mRNA cleavage factor Im 25 kDa subunit; Component of the cleavage factor Im (CFIm) complex that plays a key role in pre-mRNA 3'-processing.
    
 0.907
A0A2K3E6B7
RRM domain-containing protein.
    
 0.904
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.