STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2K3DLU5Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (127 aa)    
Predicted Functional Partners:
NOP56
Nop domain-containing protein.
   
 0.999
NOP58
Nop domain-containing protein.
   
 0.999
A0A2K3DP18
Uncharacterized protein.
   
 0.999
NOP1
Nucleolar protein, component of C/D snoRNPs.
   
 0.999
RPS6
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
  
 0.999
RPS7
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.999
RPS14
Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
  
 0.998
A0A2K3D1J1
WD_REPEATS_REGION domain-containing protein.
   
 0.996
A0A2K3DMD4
WD_REPEATS_REGION domain-containing protein.
   
 0.994
SPL5
Pre-mRNA-splicing factor.
    
 0.993
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.