STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2K3DZN1Uncharacterized protein. (1424 aa)    
Predicted Functional Partners:
A8IUL9_CHLRE
Predicted protein.
    
 0.999
A0A2K3D266
ACB domain-containing protein.
    
  0.681
A0A2K3D2N2
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.622
A0A2K3DI78
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.622
A0A2K3DTZ4
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.622
A0A2K3CVL0
AB hydrolase-1 domain-containing protein.
  
 
 0.592
RPN2
26S proteasome non-ATPase regulatory subunit 1 homolog; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
    
 0.566
RPN1
26S proteasome non-ATPase regulatory subunit 2 homolog; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
    
 0.502
A0A2K3CYU3
PCI domain-containing protein.
    
 0.497
RPN10
VWFA domain-containing protein.
   
 0.476
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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