STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2K3E5J0Uncharacterized protein. (5547 aa)    
Predicted Functional Partners:
A0A2K3D6D9
HECT domain-containing protein.
   
 
 0.723
A0A2K3DIG8
HECT domain-containing protein.
   
 
0.723
RPL40
Ribosomal protein L40.
    
 0.673
A0A2K3DWN6
Uncharacterized protein.
    
 0.583
UBA1
Ubiquitin-activating enzyme E1; Belongs to the ubiquitin-activating E1 family.
    
 0.500
RPS27a
Ribosomal protein S27a.
   
 0.496
A0A2K3DD15
U-box domain-containing protein.
     
 0.472
A0A2K3DI63
Ubiquitin-like domain-containing protein.
   
 0.472
A0A2K3CWJ7
Uncharacterized protein.
   
 0.468
POA3
Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.
    
 
 0.417
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.