STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PYK1Pyruvate kinase; Belongs to the pyruvate kinase family. (508 aa)    
Predicted Functional Partners:
PGH1
Enolase.
  
 0.995
MME3
Malic enzyme.
  
 0.971
MME5
NADP malic enzyme.
  
 0.969
MME6
NADP-dependent malic enzyme.
  
 0.969
TRK1
Transketolase.
  
 0.965
PGI1
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.965
PDC3
Uncharacterized protein.
   
 
 0.961
MME2
Malic enzyme.
  
 0.959
FSA1
Uncharacterized protein.
  
 
 0.956
TAL2
Transaldolase.
  
 
 0.954
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.