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cob protein (Chlamydomonas reinhardtii) - STRING interaction network
"cob" - Cytochrome b in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cobCytochrome b (381 aa)    
Predicted Functional Partners:
cox1
Cytochrome oxidase subunit 1 (505 aa)
  0.999
CYC1
Ubiquinol-cytochrome c oxidoreductase cytochrome c1 (314 aa)
 
  0.999
nad1
NADH dehydrogenase subunit 1 (292 aa)
     
 
  0.998
nad4
NADH dehydrogenase subunit 4 (443 aa)
     
 
  0.998
QCR7
Ubiquinol-cytochrome c oxidoreductase 14 kDa subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain (123 aa)
       
  0.997
RIP1
Rieske iron-sulfur protein of mitochondrial ubiquinol-cytochrome c reductase; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (262 aa)
 
  0.997
EDO96122
Predicted protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (272 aa)
 
  0.997
COX3
Cytochrome c oxidase subunit III; Subunits I, II and III form the functional core of the enzyme complex (382 aa)
 
  0.992
QCR6
Ubiquinol-cytochrome c oxidoreductase 8 kDa subunit; This is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain. This protein may mediate formation of the complex between cytochromes c and c1 (69 aa)
       
    0.991
COX2B
Cytochrome c oxidase subunit II, protein IIb of split subunit (153 aa)
 
  0.990
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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