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rpl20 protein (Chlamydomonas reinhardtii) - STRING interaction network
"rpl20" - Ribosomal protein L20 in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl20Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (By similarity) (112 aa)    
Predicted Functional Partners:
rpl16
Ribosomal protein L16 (136 aa)
   
  0.988
EDP09539
Predicted protein (89 aa)
   
  0.978
PRPL27
Plastid ribosomal protein L27 (161 aa)
   
  0.978
EDP06987
Predicted protein (159 aa)
   
  0.977
MRPL33
Mitochondrial ribosomal protein L33 (59 aa)
   
  0.974
rpl2
Ribosomal protein L2 (278 aa)
   
  0.972
EDO99572
Predicted protein (115 aa)
   
  0.969
MRPL19
Mitochondrial ribosomal protein L19 (312 aa)
   
  0.968
PRPL17
Plastid ribosomal protein L17 (173 aa)
   
  0.967
MRPL17
Mitochondrial ribosomal protein L17 (136 aa)
   
  0.967
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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