STRINGSTRING
atpE protein (Chlamydomonas reinhardtii) - STRING interaction network
"atpE" - CF1 ATP synthase epsilon subunit in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atpECF1 ATP synthase epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane (141 aa)    
Predicted Functional Partners:
atpB
CF1 ATP synthase beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits (491 aa)
 
  0.999
ATPD
Chloroplast ATP synthase delta chain (219 aa)
   
  0.999
ATPC
Chloroplast ATP synthase gamma chain (358 aa)
   
  0.999
atpA
CF1 ATP synthase alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit (508 aa)
   
  0.999
ATP2
Beta subunit of mitochondrial ATP synthase; Produces ATP from ADP in the presence of a proton gradient across the membrane (574 aa)
 
  0.999
ATP5
Mitochondrial ATP synthase subunit 5, OSCP subunit (233 aa)
   
  0.999
ATP3
F1F0 ATP synthase gamma subunit (324 aa)
   
  0.999
atpI
CF0 ATP synthase subunit IV; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane (238 aa)
   
  0.998
atpF
CF0 ATP synthase subunit I; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (175 aa)
   
  0.998
atpH
CF0 ATP synthase subunit III; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (82 aa)
   
  0.997
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
Server load: low (9%) [HD]