STRINGSTRING
EDO95757 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO95757" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO95757Predicted protein (142 aa)    
Predicted Functional Partners:
EDP01939
Predicted protein (435 aa)
     
  0.992
EDP05072
Predicted protein (312 aa)
     
  0.984
EDP04821
Predicted protein (341 aa)
     
  0.983
EDO98856
Predicted protein (179 aa)
     
  0.982
TFB4
TFIIH 34kDa subunit (169 aa)
     
  0.982
EDP07947
Predicted protein (356 aa)
     
  0.976
EDP05525
Predicted protein (224 aa)
       
  0.975
RPB9
DNA-directed RNA polymerase II, 14.5 kDa polypeptide; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (118 aa)
       
  0.969
RPB6
Subunit of DNA-directed RNA polymerase (87 aa)
       
  0.968
TF2H2
Transcription factor TFIIH, 44 kDa subunit (413 aa)
     
  0.964
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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