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EDO96190 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO96190" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO96190Predicted protein (284 aa)    
Predicted Functional Partners:
EDP06690
Predicted protein (795 aa)
     
   
  0.883
EDP08895
Predicted protein (277 aa)
   
     
  0.880
RNB1
3’-5’ exoribonuclease (1061 aa)
     
   
  0.850
EDP01505
Predicted protein (299 aa)
     
   
  0.785
RNB2
3’-5’ exoribonuclease II (699 aa)
     
   
  0.761
CGLD20
Predicted protein (497 aa)
     
   
  0.745
POL1A
PolI-like DNA polymerase (498 aa)
     
   
  0.735
PCN1
PCNA proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (268 aa)
     
  0.722
PAP1
Poly(a) polymerase (407 aa)
           
  0.712
TRF4
Trf4 poly(A) polymerase (1144 aa)
           
  0.710
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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