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BIOA protein (Chlamydomonas reinhardtii) - STRING interaction network
"BIOA" - Diaminopelargonic acid synthase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BIOADiaminopelargonic acid synthase (819 aa)    
Predicted Functional Partners:
BIOF
7-keto-8-aminopelargonic acid synthase (328 aa)
   
 
  0.993
EDP08299
Predicted protein (165 aa)
   
 
  0.988
BIOB
Biotin synthase (58 aa)
   
 
  0.949
LCI8
N-acetylglutamate synthase (611 aa)
   
 
  0.933
HYDEF
Iron hydrogenase assembly protein (1151 aa)
   
 
  0.911
EDP01497
N-acetyl-gamma-glutamyl-phosphate reductase (383 aa)
     
 
  0.894
AGK1
Acetylglutamate kinase-like protein (340 aa)
   
 
  0.874
OTC1
Ornithine carbamoyltransferase (364 aa)
     
   
  0.867
TPK1
Thiamine pyrophosphokinase (267 aa)
           
  0.810
NOT1
Component of CCR4-NOT transcriptional regulator complex (1440 aa)
           
  0.711
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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