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DNL4 protein (Chlamydomonas reinhardtii) - STRING interaction network
"DNL4" - DNA ligase IV in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNL4DNA ligase IV (831 aa)    
Predicted Functional Partners:
PCN1
PCNA proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (268 aa)
     
  0.951
ATM1
DNA damage signaling kinase, ATM/TEL1-related (950 aa)
     
 
  0.918
EDO98953
DNA binding protein (661 aa)
     
  0.915
RFC1
DNA replication factor C complex subunit 1 (1182 aa)
     
  0.899
EDO99592
Predicted protein (1384 aa)
   
  0.863
POLL1
Pol lambda-related class X DNA repair polymerase (1599 aa)
     
  0.857
PSO2
Artemis-related DNA-crosslink repair exonuclease (624 aa)
   
  0.831
EDP01805
Predicted protein (550 aa)
   
  0.831
EDO96710
Predicted protein (760 aa)
   
  0.831
MRE11
MRE11 eukaryotic DNA repair protein (163 aa)
     
  0.797
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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