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SRRB1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"SRRB1" - Beta subunit of the SRP receptor in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRRB1Beta subunit of the SRP receptor (238 aa)    
Predicted Functional Partners:
SRRA1
Alpha subunit of the SRP receptor (687 aa)
   
  0.987
FTSY
Chloroplast SRP receptor (338 aa)
   
  0.939
PSL1
Signal peptide peptidase, eukaryotic-type (383 aa)
     
   
  0.656
EDP01766
Predicted protein (368 aa)
     
        0.656
SEC61B
SEC61-beta subunit of ER-translocon (89 aa)
     
  0.645
EDP09219
Predicted protein (239 aa)
     
      0.645
EDO98813
Translational inhibitor protein (130 aa)
       
 
  0.629
ATO1
acetyl-CoA acyltransferase (461 aa)
     
      0.627
EDP00676
Predicted protein (256 aa)
       
      0.626
SEC63
ER-targeted preprotein translocase subunit (1075 aa)
     
   
  0.615
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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