STRINGSTRING
EDO96384 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO96384" - RNA binding protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO96384RNA binding protein (177 aa)    
Predicted Functional Partners:
COG4
Component of oligomeric golgi complex 4 (1094 aa)
     
        0.655
COG5
Component of oligomeric golgi complex 5 (764 aa)
     
        0.602
EDP04997
Potential GTPase activation protein (1138 aa)
     
        0.562
EDO98436
Predicted protein (786 aa)
     
        0.512
COG8
Component of oligomeric golgi complex 8 (546 aa)
     
        0.485
EDP02398
Predicted protein (849 aa)
     
        0.485
SEC24B
COP-II coat subunit (1080 aa)
     
        0.480
EDP06657
Predicted protein (629 aa)
     
        0.480
EDO97006
Subunit of mRNA cleavage and polyadenylation specificity factor (690 aa)
     
        0.480
SEC24C
COP-II coat subunit (825 aa)
     
        0.479
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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