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SRP43 protein (Chlamydomonas reinhardtii) - STRING interaction network
"SRP43" - Chloroplast SRP43/CAO subunit of signal recognition particle in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRP43Chloroplast SRP43/CAO subunit of signal recognition particle (382 aa)    
Predicted Functional Partners:
EDP00260
Chloroplast SRP54 subunit of signal recognition particle (549 aa)
     
 
  0.979
EDP05135
SNF2 superfamily protein (1610 aa)
     
  0.855
ALB3.1
Inner membrane ALBINO3-like protein 1 (495 aa)
     
 
  0.808
FTSY
Chloroplast SRP receptor (338 aa)
     
 
  0.793
EDO96560
Serine/threonine protein kinase (499 aa)
     
  0.768
RFC1
DNA replication factor C complex subunit 1 (1182 aa)
     
    0.750
CDKG1
Cyclin dependent kinase (387 aa)
       
  0.744
CDKA1
Cyclin dependent protein kinase (326 aa)
       
  0.744
EDP07659
Predicted protein (417 aa)
       
  0.744
EDP04150
Predicted protein (164 aa)
       
  0.744
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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