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EDO96399 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO96399" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO96399Predicted protein (191 aa)    
Predicted Functional Partners:
EDP00317
RAN GTPase activating protein, RANGAP1 (498 aa)
     
        0.689
RPL8
Ribosomal protein L8 (259 aa)
       
 
  0.682
EDP09315
High mobility group protein (552 aa)
     
        0.571
EDP09043
Predicted protein (1130 aa)
     
        0.566
NUP155
Nuclear pore protein (868 aa)
     
        0.538
EDP02651
Predicted protein (516 aa)
     
        0.515
EDP05167
Predicted protein (1378 aa)
     
        0.510
EDP06964
Predicted protein (464 aa)
     
        0.508
EDP05271
RNA processing protein (511 aa)
     
        0.508
EDO96335
Predicted protein (540 aa)
     
        0.505
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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