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CCDA1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"CCDA1" - C-type cytochrome biogenesis protein in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDA1C-type cytochrome biogenesis protein (308 aa)    
Predicted Functional Partners:
CYC4
Chloroplast cytochrome c (161 aa)
           
  0.775
NTRC1
NADPH-dependent thioredoxin reductase (517 aa)
         
  0.747
SEC12
Regulator of COP-II vesicle coat (471 aa)
           
  0.706
CCS1
C-type cytochrome synthesis 1; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment (398 aa)
   
   
  0.670
ccsA
Heme attachment protein; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment (353 aa)
         
  0.659
EDP04704
Thioredoxin-like protein (247 aa)
   
   
  0.635
TRXH
Thioredoxin h1 (113 aa)
   
   
  0.545
EDO98080
Predicted protein (232 aa)
         
  0.545
TRXf1
Thioredoxin f1 (173 aa)
   
   
  0.532
TRXm
Thioredoxin m (140 aa)
         
  0.532
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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