STRINGSTRING
EDO96442 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO96442" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO96442Predicted protein (150 aa)    
Predicted Functional Partners:
MTR4
DEAD-box family ATP dependent helicase (945 aa)
     
        0.607
EDP07902
Predicted protein (1905 aa)
     
        0.523
EDP04019
Predicted protein (137 aa)
     
        0.510
EDP09176
Predicted protein (733 aa)
     
        0.506
RPA1
DNA-directed RNA polymerase I subunit A; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1515 aa)
     
        0.504
EDO96736
Predicted protein (485 aa)
     
        0.504
EDP05842
DEAD/DEAH box helicase-related protein (496 aa)
     
        0.503
EDP02348
Predicted protein (341 aa)
     
        0.502
EDP07890
Predicted protein (319 aa)
     
        0.501
EDP05780
Predicted protein (1086 aa)
     
        0.501
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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