STRINGSTRING
EDO96454 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO96454" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO96454Predicted protein (1168 aa)    
Predicted Functional Partners:
EDP06372
Copper-translocating P-type ATPase (504 aa)
   
  0.744
EDO98549
Predicted protein (286 aa)
     
 
  0.727
CTP2
Heavy metal transporting ATPase (1086 aa)
   
  0.726
HMA1
Heavy metal transporting ATPase (1189 aa)
   
  0.726
CTP3
Heavy metal transporting ATPase (1041 aa)
   
  0.726
CTP1
Heavy metal transporting ATPase (1097 aa)
   
  0.726
EDP04219
Predicted protein (555 aa)
   
 
  0.709
EDO97595
Nuclear pre-mRNA splicing factor, component of splicing factor 3b (1078 aa)
     
        0.692
EDP04595
Predicted protein (601 aa)
   
 
  0.684
EDO98550
Predicted protein (78 aa)
     
 
  0.629
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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