STRINGSTRING
SSA7 protein (Chlamydomonas reinhardtii) - STRING interaction network
"SSA7" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSA7Predicted protein (765 aa)    
Predicted Functional Partners:
EDP05271
RNA processing protein (511 aa)
     
  0.997
EDP09275
Predicted protein (73 aa)
     
  0.995
EDP07918
Predicted protein (199 aa)
     
  0.994
PAP1
Poly(a) polymerase (407 aa)
     
  0.990
EDP08751
Predicted protein (461 aa)
     
  0.987
EDO97006
Subunit of mRNA cleavage and polyadenylation specificity factor (690 aa)
     
  0.987
EDP05541
Predicted protein (389 aa)
     
  0.986
EDP08752
Predicted protein (366 aa)
     
  0.986
EDP08387
Predicted protein (517 aa)
     
 
  0.982
EDP08434
poly(A) binding protein (136 aa)
     
  0.982
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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