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EDO96468 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO96468" - RNA helicase, activating signal cointegrator 1 in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO96468RNA helicase, activating signal cointegrator 1 (2169 aa)    
Predicted Functional Partners:
EDP05167
Predicted protein (1378 aa)
     
  0.991
PRP8
Splicing factor, component of the U5 snRNP and of the spliceosome (2346 aa)
     
  0.990
XAB2
Transcription-coupled DNA repair protein (886 aa)
     
  0.981
EDP09592
Predicted protein (698 aa)
     
  0.978
PRP6
Splicing factor, component of the U4/U6-U5 snRNP complex (947 aa)
     
  0.973
EDP09509
Predicted protein (494 aa)
     
  0.971
PRP17
Nuclear pre-mRNA splicing factor, component of the spliceosome (313 aa)
     
  0.966
EDP07967
Predicted protein (343 aa)
     
  0.965
CWC22
Cwc22 pre-mRNA splicing factor (592 aa)
     
  0.964
EDP06331
Predicted protein (276 aa)
     
  0.960
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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