STRINGSTRING
EDO96478 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO96478" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO96478Predicted protein (475 aa)    
Predicted Functional Partners:
EDP07672
Predicted protein (246 aa)
           
  0.807
ERM2
ERD4-related membrane protein (1077 aa)
           
  0.807
AMYA1
Alpha-amylase (408 aa)
           
  0.586
FAP50
Flagellar associated protein; Key component of the nexin-dynein regulatory complex (N- DRC), essential for N-DRC integrity. Involved in the regulation of flagellar motility (1159 aa)
       
 
  0.586
ASP1
Pepsin-type aspartyl protease (303 aa)
     
 
  0.578
ASP2
Pepsin-type aspartyl protease (485 aa)
     
 
  0.558
ASP3
Pepsin-type aspartyl protease (547 aa)
     
 
  0.558
AMYA2
Alpha-amylase (413 aa)
           
  0.511
LIG1
DNA ligase (813 aa)
     
   
  0.485
CEP1
Cysteine endopeptidase (469 aa)
     
   
  0.470
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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